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GENE-APL7 3.5” Subcompact Board User’s Manual 2 Last Updated: August 25, 2021...
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Copyright Notice This document is copyrighted, 2021. All rights are reserved. The original manufacturer reserves the right to make improvements to the products described in this manual at any time without notice. No part of this manual may be reproduced, copied, translated, or transmitted in any form or by any means without the prior written permission of the original manufacturer.
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Acknowledgement All other products’ name or trademarks are properties of their respective owners. Microsoft Windows is a registered trademark of Microsoft Corp. ⚫ Intel®, Pentium®, and Celeron® are registered trademarks of Intel Corporation ⚫ Intel Atom™ is a trademark of Intel Corporation ⚫...
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Packing List Before setting up your product, please make sure the following items have been shipped: Item Quantity GENE-APL7 MB ⚫ If any of these items are missing or damaged, please contact your distributor or sales representative immediately. Preface...
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About this Document This User’s Manual contains all the essential information, such as detailed descriptions and explanations on the product’s hardware and software features (if any), its specifications, dimensions, jumper/connector settings/definitions, and driver installation instructions (if any), to facilitate users in setting up their product. Users may refer to the product page at AAEON.com for the latest version of this document.
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Safety Precautions Please read the following safety instructions carefully. It is advised that you keep this manual for future references All cautions and warnings on the device should be noted. Make sure the power source matches the power rating of the device. Position the power cord so that people cannot step on it.
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If any of the following situations arises, please the contact our service personnel: Damaged power cord or plug Liquid intrusion to the device iii. Exposure to moisture Device is not working as expected or in a manner as described in this manual The device is dropped or damaged Any obvious signs of damage displayed on the device...
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FCC Statement This device complies with Part 15 FCC Rules. Operation is subject to the following two conditions: (1) this device may not cause harmful interference, and (2) this device must accept any interference received including interference that may cause undesired operation.
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China RoHS Requirement (EN) Poisonous or Hazardous Substances or Elements in Products AAEON Main Board/ Daughter Board/ Backplane Poisonous or Hazardous Substances or Elements Hexavalent Polybrominated Polybrominated Component Lead Mercury Cadmium Chromium Biphenyls Diphenyl Ethers (Pb) (Hg) (Cd) (Cr(VI)) (PBB) (PBDE) PCB &...
Table of Contents Chapter 1 - Product Specifications..................1 Specifications ......................2 Chapter 2 – Hardware Information ..................6 Dimensions ....................... 7 Jumpers and Connectors ..................9 Assembly Options ....................11 Block Diagram ......................12 List of Jumpers ......................13 2.5.1 Clear CMOS Jumper (JP1) .................
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2.6.9 LPC and I2C Port (CN17) ................25 2.6.10 Micro SIM Card Socket (CN18) ..............26 2.6.11 CPU FAN (Optional) (CN22) ..............26 2.6.12 8-bit DIO Port (CN24) ................27 2.6.13 +5V Output for SATA Drive (CN27) ............28 2.6.14 RTC Battery (CN28) ...................
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3.4.5 SIO Configuration ..................56 3.4.5.1 Serial Port 1 Configuration............57 3.4.5.2 Serial Port 2 Configuration ............58 3.4.5.3 Serial Port 3 Configuration ............59 3.4.5.4 Serial Port 4 Configuration ............60 3.4.5.5 Serial Port 5 Configuration ............61 3.4.5.6 Serial Port 6 Configuration ............
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IRQ Mapping Chart ....................87 Appendix B – Mating Connectors ..................98 List of Mating Connectors and Cables .............. 99 Preface...
Specifications System Form Factor 3.5'' Subcompact Board Intel® Atom™/ Celeron®/ Pentium® Processor: Pentium N4200 (4C/4T, 1.10 GHz, up to 2.50 GHz) Celeron N3350 (2C/2T, 1.10 GHz, up to 2.40 GHz) Atom E3950 (4C/4T, 1.60 GHz, up to 2.00GHz) Atom E3940 (4C/4T, 1.60GHz, up to 1.80GHz) Atom E3930 (2C/2T, 1.30GHz, up to 1.80GHz) CPU TDP 6W: N4200, N3350...
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Power Power Requirement 12V Only Power Supply Type AT/ATX Connector Phoenix 2-pin Connector Power Consumption Typical Intel® E3950, DDR3L 1866MHz 8GB, 4.15A at +12V Power Consumption Max Intel® E3950, DDR3L 1866MHz 8GB, 4.29A at +12V Display Controller Intel® HD Graphics 500/505 LVDS/ eDP LVDS1 Dual Channel 18/24bit x 1 (Optional: eDP1.3)
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External I/O Power Input Phoenix 2-pin Connector Others — Internal I/O USB2.0 x 8 Serial Port COM3 ~ COM6 (RS232, COM3~COM5 support 5V/12V/RI) Optional: COM3 ~ COM12 Video LVDS1/eDP (Default: LVDS1) LVDS2 SATA SATA III x 1 +5V SATA Power Connector x 1 Audio Audio Header x 1 Speaker Header x 2 (optional)
List of Jumpers Please refer to the table below for all of the board’s jumpers that you can configure for your application Label Function Clear CMOS Jumper LVDS1/eDP VDD and BLKT VCC Selection LVDS1/eDP BLKT Control Mode Selection LVDS2 Port BLKT Control Mode Selection LVDS2 Port VDD and BLKT VCC Selection Front Panel Connector COM2 Pin8 Function Selection...
List of Connectors Please refer to the table below for all of the board’s connectors that you can configure for your application Label Function LVDS/eDP Port Inverter / Backlight Connector LVDS1/eDP Port LVDS2 Port External +12V Input Audio I/O Port LVDS2 Port Inverter / Backlight Connector Speaker (Left) CN10...
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Label Function CN26 COM Port 4 CN27 +5V Output for SATA Drive CN28 RTC Battery CN29 USB2.0 Port 5 CN30 USB2.0 Port 4 CN31 USB2.0 Port 3 CN32 USB2.0 Port 2 CN33 USB2.0 Port 6 CN34 USB2.0 Port 7 CN35 USB2.0 Port 8 CN36 USB2.0 Port 9...
2.6.1 LVDS and eDP Port Inverter / Backlight Connector (CN2, CN8) BLK_PWR BKL_CONTROL BKL_ENABLE Pin Name Signal Type Signal level BKL_PWR +5V / +12V BKL_CONTROL BKL_ENABLE +3.3V Note: BKL_PWR can be set to +5V or +12V by configuring JP2 and JP5 for dedicated port.
2.6.2 LVDS Port (CN4, CN5) Pin Name Signal Type Signal Level BKL_ENABLE BKL_CONTROL LCD_PWR +3.3V/+5V LVDS_A_CLK- DIFF LVDS_A_CLK+ DIFF LCD_PWR +3.3V/+5V LVDS_DA0- DIFF LVDS_DA0+ DIFF LVDS_DA1- DIFF LVDS_DA1+ DIFF LVDS_DA2- DIFF Chapter 2 – Hardware Information...
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Pin Name Signal Type Signal Level LVDS_DA2+ DIFF LVDS_DA3- DIFF LVDS_DA3+ DIFF DDC_DATA +3.3V DDC_CLK +3.3V LVDS_DB0- DIFF LVDS_DB0+ DIFF LVDS_DB1- DIFF LVDS_DB1+ DIFF LVDS_DB2- DIFF LVDS_DB2+ DIFF LVDS_DB3- DIFF LVDS_DB3+ DIFF LCD_PWR +3.3V/+5V LVDS_B_CLK- DIFF LVDS_B_CLK+ DIFF Note: LCD_PWR can be set to +3.3V or +5V by configuring JP2 and JP5 for dedicated port.
2.6.3 External +12V Input (CN6) Pin Name Signal Type Signal Level +12V +12V Note: The maximum current rating of Pin #1/+12V is 7A. 2.6.4 Audio I/O Port (CN7) MIC_L MIC_R GND_AUDIO LINE_L_IN LINE_R_IN GND_AUDIO LEFT_OUT GND_AUDIO RIGHT_OUT +5V_AUDIO Pin Name Signal Type Signal Level MIC_L...
Pin Name Signal Type Signal Level LINE_R_IN GND_AUDIO LEFT_OUT GND_AUDIO RIGHT_OUT +5V_AUDIO 2.6.5 Speaker (Left) (CN9) Pin Name Signal Type Signal Level SPK_L+ SPK_L- 2.6.6 I2S I/O Port (CN10) Pin Name Signal Type Signal Level I2S_MCLK I2S_BCLK +V1.8A +1.8V I2S_SDI I2S_SDO I2S_WS_SYNC Chapter 2 –...
2.6.7 Speaker (Right) (CN11) Pin Name Signal Type Signal Level SPK_R+ SPK_R- 2.6.8 COM Port (CN12, CN13, CN14, CN15, CN16, CN19, CN20, CN21, CN25, CN26) Note: Pin#8 function can be set by configuring JP9 and JP11 for dedicated COM port (COM1 on CN25 and COM4 on CN26).
RS-232 Pin Name Signal Type Signal Level ±9V RI/+5V/+12V IN/ PWR +5V/+12V 2.6.9 LPC and I2C Port (CN17) Pin Name Signal Type Signal Level LAD0 +3.3V LAD1 +3.3V LAD2 +3.3V LAD3 +3.3V +3.3V +3.3V LFRAME# LRESET# +3.3V LCLK I2C DATA I2C CLK SERIRQ +3.3V...
2.6.10 Micro SIM Card Socket (CN18) Pin Name Signal Type Signal Level UIM_PWR UIM_RST UIM_CLK UIM_VPP UIM_DATA 2.6.11 CPU FAN (Optional) (CN22) Pin Name Signal Type Signal Level FAN_POWER +12V FAN_TAC Note: The maximum current rating of Pin#2/FAN_POWER is 0.5A. Chapter 2 –...
2.6.12 8-bit DIO Port (CN24) Pin Name Signal Type Signal Level GPIO0 GPIO1 GPIO2 GPIO3 GPIO4 GPIO5 GPIO6 GPIO7 Note: The maximum current rating of Pin#9/+5V is 1A. Chapter 2 – Hardware Information...
2.6.13 +5V Output for SATA Drive (CN27) Pin Name Signal Type Signal Level Note: The maximum current rating of Pin#1/+5V is 1A. 2.6.14 RTC Battery (CN28) Pin Name Signal Type Signal Level +3.3V 3.3V 2.6.15 USB 2.0 Port (CN29-36) Pin Name Signal Type Signal Level +5VSB...
2.6.16 SATA III Port (CN37) Pin 1 Pin 7 Pin Name Signal Type Signal Level SATA_TX+ DIFF SATA_TX- DIFF SATA_RX- DIFF SATA_RX+ DIFF Chapter 2 – Hardware Information...
2.6.17 Dual USB3.0 Connector Port 0 and Port 1 (CN38) Port 1 11 12 13 Port 0 2 3 4 Pin Name Signal Type Signal Level +5VSB USB0_D- DIFF USB0_D+ DIFF USB0_SSRX− DIFF USB0_SSRX+ DIFF USB0_SSTX− DIFF USB0_SSTX+ DIFF +5VSB USB1_D- DIFF USB1_D+...
2.6.19 COM Port 2 and COM Port 3 (CN41) RS-232 Pin Name Signal Type Signal Level ±9V ±9V ±9V RI/+5V/+12V IN/ PWR RI/+5V/+12V Note: The maximum current rating of Pin#9 is 1A. Chapter 2 – Hardware Information...
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RS-422 (COM2 Only) Pin Name Signal Type Signal Level RS422_TX- ±5V RS422_TX+ ±5V RS422_RX+ RS422_RX- NC/+5V/+12V +5V/+12V RS-485 (COM2 Only) Pin Name Signal Type Signal Level RS485_D- ±5V RS485_D+ ±5V NC/+5V/+12V +5V/+12V Chapter 2 – Hardware Information...
2.6.20 VGA Port (CN42) Pin Name Signal Type Signal Level Analog GREEN Analog BLUE Analog RED_GND_RTN GREEN_GND_RTN BLUE_GND_RTN CRT_PLUG# DDC_DATA HSYNC VSYNC DDC_CLK Chapter 2 – Hardware Information...
2.6.21 eDP Port (CN43) Note 1: LCD_PWR can be set to +3.3V or +5V by configuring JP2 for eDP Port. Driving current supports up to 1A. Note 2: +VCC_BKLT_eDP can be set to +5V or +12V by configuring JP2 for eDP Port. Driving current supports up to 2A.
Pin Name Signal Type Signal Level BKLTNESS BKLTEN eDP_HPD +VCC_BKLT_eDP +12V/5V +VCC_BKLT_eDP +12V/5V +VCC_BKLT_eDP +12V/5V +VCC_BKLT_eDP +12V/5V 2.6.22 mSATA/ Mini Card Slot (Full-Sized) (CN44) Note: Default setting is mSATA. Select mode in BIOS. Pin Name Signal Type Signal Level PCIE_WAKE# +3.3VSB +3.3V +1.5V...
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Pin Name Signal Type Signal Level PCIE_REF_CLK- DIFF PCIE_REF_CLK+ DIFF W_DISABLE# +3.3V PCIE_RST# +3.3V SATA_RX- DIFF +3.3VSB +3.3V SATA_RX+ DIFF +1.5V +1.5V SMB_CLK +3.3V SATA_TX- DIFF SMB_DATA +3.3V SATA_TX+ DIFF Chapter 2 – Hardware Information...
Pin Name Signal Type Signal Level USB_D- DIFF USB_D+ DIFF +3.3VSB +3.3V +3.3VSB +3.3V +1.5V +1.5V +3.3VSB +3.3V 2.6.23 Mini Card Slot (Full-Sized) (CN45) Pin Name Signal Type Signal Level PCIE_WAKE# +3.3VSB +3.3V Chapter 2 – Hardware Information...
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Pin Name Signal Type Signal Level +1.5V +1.5V PCIE_CLK_REQ# PCIE_REF_CLK- DIFF PCIE_REF_CLK+ DIFF W_DISABLE# +3.3V PCIE_RST# +3.3V PCIE_RX- DIFF +3.3VSB +3.3V PCIE_RX+ DIFF +1.5V +1.5V SMB_CLK +3.3V PCIE_TX- DIFF Chapter 2 – Hardware Information...
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Pin Name Signal Type Signal Level SMB_DATA +3.3V PCIE_TX+ DIFF USB_D- DIFF USB_D+ DIFF +3.3VSB +3.3V +3.3VSB +3.3V +1.5V +1.5V +3.3VSB +3.3V Chapter 2 – Hardware Information...
2.6.24 VGA connector (CN46) Pin Name Signal Type Signal Level VSYNC HSYNC DDC_CLK DDC_DAT BLUE Analog GREEN Analog Analog 2.6.25 DDR3L SO-DIMM Slot (DIMM1) Standard Specifications Chapter 2 – Hardware Information...
System Test and Initialization The system uses certain routines to perform testing and initialization during the boot up sequence. If an error, fatal or non-fatal, is encountered, the system will output a few short beeps or an error message. The board can usually continue the boot up sequence with non-fatal errors.
AMI BIOS Setup The AMI BIOS ROM has a pre-installed Setup program that allows users to modify basic system configurations, which is stored in the battery-backed CMOS RAM and BIOS NVRAM so that the information is retained when the power is turned off. To enter BIOS Setup, press <Del>...
3.4.2 SATA Configuration Options Summary Chipset SATA Disabled Enabled Optimal Default, Failsafe Default Enables or Disables the Chipset SATA Controller. The Chipset SATA controller supports the 2 black internal SATA ports (up to 3Gb/s supported per port). SATA GEN SPEED Auto Optimal Default;...
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Options Summary mSATA Port Disabled Enabled Optimal Default, Failsafe Default Enable or Disable SATA Port Chapter 3 – AMI BIOS Setup...
3.4.4.1 CPU Smart Fan Mode Configuration Options Summary Fan 1 Smart Fan Manual Duty Mode Control Auto Duty-Cycle Mode Optimal Default, Failsafe Default Smart Fan Mode Select Temperature Source CPU (external) Optimal Default, Failsafe Default System Select the monitored temperature source for this fan. Duty Cycle 1 Temperature 1 Duty Cycle 2...
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Options Summary Auto fan speed control. Fan speed will follow different temperature by different duty cycle 1-100 Chapter 3 – AMI BIOS Setup...
3.4.5.1 Serial Port 1 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=3F8h; IRQ=11 IO=2F8h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.2 Serial Port 2 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2F8h; IRQ=11 IO=3F8h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.3 Serial Port 3 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=3E8h; IRQ=11 IO=2E8h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.4 Serial Port 4 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2E8h; IRQ=11 IO=3E8h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.5 Serial Port 5 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2D0h; IRQ=11 IO=2C0h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.6 Serial Port 6 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2C0h; IRQ=11 IO=2D0h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.7 Serial Port 7 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2A0h; IRQ=10 IO=2A8h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.8 Serial Port 8 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2A8h; IRQ=10 IO=2A0h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.9 Serial Port 9 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2B0h; IRQ=10 IO=2B8h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.10 Serial Port 10 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2B8h; IRQ=10 IO=2B0h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.11 Serial Port 11 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=280h; IRQ=10 IO=288h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.5.12 Serial Port 12 Configuration Options Summary Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=288h; IRQ=10 IO=280h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.6 Power Management Options Summary Power Mode ATX Type Optimal Default, Failsafe Default AT Type Select system power mode Restore AC Power Loss Last State Optimal Default, Failsafe Default Always On Always Off RTC wake system from S5 Disable Optimal Default, Failsafe Default Fixed Time Fixed Time: System will wake on the hr::min::sec specified.
3.4.7 Digital IO Port Configuration Options Summary DIO Port # Output Input Set DIO as Input or Output Output Level High Optimal Default, Failsafe Default Set output level when DIO pin is output Chapter 3 – AMI BIOS Setup...
Setup Submenu: Security Change User/Administrator Password You can set an Administrator Password or User Password. An Administrator Password must be set before you can set a User Password. The password will be required during boot up, or when the user enters the Setup utility. A User Password does not provide access to many of the features in the Setup utility.
Driver Download/Installation Drivers for the GENE-APL7 A11 can be downloaded from the product page on the AAEON website by following this link: https://www.aaeon.com/en/p/embedded-single-board-computers-gene-APL7 Download the driver(s) you need and follow the steps below to install them. Step 1 – Install Chipset Drivers Open the Step1 - Chipset folder followed by SetupChipset.exe Follow the instructions Drivers will be installed automatically...
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Step 4 – Install Audio Drivers Open the Step4 - Audio folder followed by 0006-64bit_Win7_Win8_Win81_Win10_R279.exe Follow the instructions Drivers will be installed automatically Step 5 – Install TXE Driver Open the Step5 - TXE folder followed by SetupTXE.exe Follow the instructions Drivers will be installed automatically Step 6 –...
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Appendix B Appendix B – Mating Connectors...
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List of Mating Connectors and Cables The table notes mating connectors and available cables. Connector Function Mating Connector Available Cable P/N Label Cable Vendor Model no CN8, CN2 LVDS Port PHR-5 Inverter CN4, CN5 LVDS HIROSE DF13-30DS-1.25C Audio Molex 51021-1000 Audio Cable 1709100254 CN9, CN11 Speaker...